Bacterial whole genome submissions on NCBI
Mitra,M. and Stanescu,A. De novo assembly of the genome of a novel bacterial strain:Sphingobium yanoikuyae strain CC4533, NCBI, Jan 11, 2023;
https://www.ncbi.nlm.nih.gov/nuccore/CP115456.1
https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_027627615.1/
Mitra,M. and Stanescu,A. De novo assembly of the genome of a novel bacterial strain: Acidovorax temperans strain LMJ, NCBI; February 12, 2023;
https://www.ncbi.nlm.nih.gov/nuccore/CP117193.1
https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_028596105.1/
Mitra,M. and Stanescu,A. De novo assembly of the genome of a novel bacterial strain:Microbacterium sp. strain Clip185, NCBI, February 20 2023;
https://www.ncbi.nlm.nih.gov/nuccore/NZ_CP117996.1
https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_028743715.1/
Bacterial whole genome submissions on KBase (DOE)
Stanescu, A; Mitra M October 6th, 2025. Complete genome sequence of Sphingobium yanoikuyae strain CC4533. DOE Systems Biology Knowledgebase. https://doi.org/10.25982/219679.217/2997510.
Mitra, M; Stanescu, A. December 4th, 2024. Complete genome sequence of a novel Microbacterium sp. strain Clip185. DOE Systems Biology Knowledgebase. https://doi.org/10.25982/193023.110/2479104
Mitra M, Stanescu A. December 6, 2023. Complete Genome Sequence of Acidovorax temperans strain LMJ from a contaminated Chlamydomonas reinhardtii culture plate. DOE Systems Biology Knowledgebase. https://doi.org/10.25982/161632.357/2228677.
Figshare Data Sets linked to Peer-reviewed Publications in Journals
Mitra, M; Stanescu, Ana (2025). Supplementary PacBio Sequel II continuous long read sequencing data, read quality, assembly statistics, genome quality and contig gene annotation information of Sphingobium yanoikuyae strain CC4533. figshare. Online resource. https://doi.org/10.6084/m9.figshare.30340213.v3
Mitra, M; Stanescu, Ana (2024). Supplementary genome annotation data of a novel Microbacterium sp. strain Clip185. figshare. Online resource. https://doi.org/10.6084/m9.figshare.28063082.v5
Mitra, M; Stanescu, Ana (2024). A table showing contig gene annotation information for the complete genome of Acidovorax temperans strain (GenBank accession number GCA_028596105.1). figshare. Dataset. https://doi.org/10.6084/m9.figshare.25268392.v2